Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SGCEO43556 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SGCEO43556 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
SGCEO43556 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SGCEO43556 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SGCEO43556 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SGCEO43556 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SGCEO43556 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SGCEO43556 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SGCEO43556 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SGCEO43556 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.31■□□□□ 0.84
SGCEO43556 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.31■□□□□ 0.84
SGCEO43556 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.31■□□□□ 0.84
SGCEO43556 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.31■□□□□ 0.84
SGCEO43556 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SGCEO43556 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.31■□□□□ 0.84
SGCEO43556 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.31■□□□□ 0.84
SGCEO43556 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.31■□□□□ 0.84
SGCEO43556 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SGCEO43556 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.31■□□□□ 0.84
SGCEO43556 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SGCEO43556 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SGCEO43556 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
SGCEO43556 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SGCEO43556 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SGCEO43556 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SGCEO43556 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SGCEO43556 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.3■□□□□ 0.84
SGCEO43556 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SGCEO43556 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SGCEO43556 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.29■□□□□ 0.84
SGCEO43556 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SGCEO43556 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SGCEO43556 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.29■□□□□ 0.84
SGCEO43556 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SGCEO43556 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SGCEO43556 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SGCEO43556 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SGCEO43556 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
SGCEO43556 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SGCEO43556 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SGCEO43556 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SGCEO43556 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SGCEO43556 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
SGCEO43556 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SGCEO43556 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SGCEO43556 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SGCEO43556 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
SGCEO43556 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.26■□□□□ 0.83
SGCEO43556 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGCEO43556 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGCEO43556 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGCEO43556 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SGCEO43556 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGCEO43556 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SGCEO43556 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.25■□□□□ 0.83
SGCEO43556 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.25■□□□□ 0.83
SGCEO43556 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGCEO43556 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SGCEO43556 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SGCEO43556 AC120024.1-201ENST00000562672 995 ntBASIC20.24■□□□□ 0.83
SGCEO43556 MIR4508-201ENST00000584178 70 ntBASIC20.24■□□□□ 0.83
SGCEO43556 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.24■□□□□ 0.83
SGCEO43556 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
SGCEO43556 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGCEO43556 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SGCEO43556 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.23■□□□□ 0.83
SGCEO43556 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGCEO43556 KRT18P24-201ENST00000344739 1156 ntBASIC20.23■□□□□ 0.83
SGCEO43556 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SGCEO43556 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SGCEO43556 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGCEO43556 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGCEO43556 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SGCEO43556 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.23■□□□□ 0.83
SGCEO43556 THA1P-201ENST00000590384 1145 ntBASIC20.23■□□□□ 0.83
SGCEO43556 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SGCEO43556 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SGCEO43556 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SGCEO43556 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SGCEO43556 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGCEO43556 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.22■□□□□ 0.83
SGCEO43556 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms