Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SPTLC1O15269 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SPTLC1O15269 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.83■■□□□ 1.57
SPTLC1O15269 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPTLC1O15269 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.83■■□□□ 1.57
SPTLC1O15269 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.83■■□□□ 1.57
SPTLC1O15269 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.83■■□□□ 1.57
SPTLC1O15269 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPTLC1O15269 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.82■■□□□ 1.56
SPTLC1O15269 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SPTLC1O15269 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPTLC1O15269 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPTLC1O15269 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
SPTLC1O15269 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.82■■□□□ 1.56
SPTLC1O15269 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPTLC1O15269 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
SPTLC1O15269 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.82■■□□□ 1.56
SPTLC1O15269 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SPTLC1O15269 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPTLC1O15269 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
SPTLC1O15269 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.82■■□□□ 1.56
SPTLC1O15269 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPTLC1O15269 AC131274.2-201ENST00000580697 1507 ntBASIC24.81■■□□□ 1.56
SPTLC1O15269 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPTLC1O15269 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
SPTLC1O15269 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.81■■□□□ 1.56
SPTLC1O15269 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.81■■□□□ 1.56
SPTLC1O15269 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.81■■□□□ 1.56
SPTLC1O15269 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SPTLC1O15269 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.8■■□□□ 1.56
SPTLC1O15269 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SPTLC1O15269 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPTLC1O15269 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.8■■□□□ 1.56
SPTLC1O15269 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.8■■□□□ 1.56
SPTLC1O15269 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.8■■□□□ 1.56
SPTLC1O15269 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.8■■□□□ 1.56
SPTLC1O15269 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPTLC1O15269 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPTLC1O15269 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPTLC1O15269 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPTLC1O15269 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SPTLC1O15269 HLA-L-211ENST00000482052 1765 ntBASIC24.8■■□□□ 1.56
SPTLC1O15269 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPTLC1O15269 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SPTLC1O15269 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.79■■□□□ 1.56
SPTLC1O15269 AC004448.1-201ENST00000458332 883 ntBASIC24.79■■□□□ 1.56
SPTLC1O15269 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SPTLC1O15269 AC138932.3-201ENST00000567634 1902 ntBASIC24.78■■□□□ 1.56
SPTLC1O15269 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.78■■□□□ 1.56
SPTLC1O15269 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.78■■□□□ 1.56
SPTLC1O15269 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.78■■□□□ 1.56
SPTLC1O15269 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
SPTLC1O15269 MIR6724-1-201ENST00000616420 92 ntBASIC24.78■■□□□ 1.56
SPTLC1O15269 MIR6724-2-201ENST00000616483 92 ntBASIC24.78■■□□□ 1.56
SPTLC1O15269 MIR6724-4-201ENST00000617390 92 ntBASIC24.78■■□□□ 1.56
SPTLC1O15269 MIR6724-3-201ENST00000622482 92 ntBASIC24.78■■□□□ 1.56
SPTLC1O15269 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.78■■□□□ 1.56
SPTLC1O15269 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SPTLC1O15269 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SPTLC1O15269 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.77■■□□□ 1.56
SPTLC1O15269 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.77■■□□□ 1.56
SPTLC1O15269 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.77■■□□□ 1.56
SPTLC1O15269 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SPTLC1O15269 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPTLC1O15269 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPTLC1O15269 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SPTLC1O15269 MIR638-201ENST00000385237 100 ntBASIC24.76■■□□□ 1.55
SPTLC1O15269 MIR6722-201ENST00000617286 78 ntBASIC24.76■■□□□ 1.55
SPTLC1O15269 AL117332.1-201ENST00000622628 974 ntBASIC24.76■■□□□ 1.55
SPTLC1O15269 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.76■■□□□ 1.55
SPTLC1O15269 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SPTLC1O15269 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SPTLC1O15269 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SPTLC1O15269 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.75■■□□□ 1.55
SPTLC1O15269 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SPTLC1O15269 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
SPTLC1O15269 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.74■■□□□ 1.55
SPTLC1O15269 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.74■■□□□ 1.55
SPTLC1O15269 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.74■■□□□ 1.55
SPTLC1O15269 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SPTLC1O15269 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SPTLC1O15269 AC135731.1-201ENST00000569415 2548 ntBASIC24.73■■□□□ 1.55
SPTLC1O15269 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPTLC1O15269 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPTLC1O15269 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPTLC1O15269 AC142381.3-201ENST00000568208 1670 ntBASIC24.73■■□□□ 1.55
SPTLC1O15269 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
SPTLC1O15269 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPTLC1O15269 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SPTLC1O15269 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.73■■□□□ 1.55
SPTLC1O15269 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.73■■□□□ 1.55
SPTLC1O15269 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.73■■□□□ 1.55
SPTLC1O15269 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SPTLC1O15269 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.72■■□□□ 1.55
SPTLC1O15269 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.72■■□□□ 1.55
SPTLC1O15269 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SPTLC1O15269 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPTLC1O15269 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
SPTLC1O15269 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
SPTLC1O15269 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms