Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH17O14917 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDH17O14917 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH17O14917 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDH17O14917 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH17O14917 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH17O14917 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDH17O14917 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH17O14917 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH17O14917 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH17O14917 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDH17O14917 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH17O14917 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH17O14917 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH17O14917 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDH17O14917 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDH17O14917 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDH17O14917 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH17O14917 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH17O14917 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH17O14917 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH17O14917 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDH17O14917 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDH17O14917 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH17O14917 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH17O14917 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH17O14917 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDH17O14917 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH17O14917 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDH17O14917 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.96■■□□□ 1.11
PCDH17O14917 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDH17O14917 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH17O14917 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH17O14917 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH17O14917 LINC01124-201ENST00000409786 2117 ntBASIC21.95■■□□□ 1.11
PCDH17O14917 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH17O14917 AC090877.2-201ENST00000558441 1738 ntBASIC21.95■■□□□ 1.1
PCDH17O14917 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH17O14917 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH17O14917 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH17O14917 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH17O14917 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH17O14917 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.95■■□□□ 1.1
PCDH17O14917 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.95■■□□□ 1.1
PCDH17O14917 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH17O14917 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH17O14917 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH17O14917 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH17O14917 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH17O14917 SLC6A10P-202ENST00000431994 2058 ntBASIC21.94■■□□□ 1.1
PCDH17O14917 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PCDH17O14917 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH17O14917 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH17O14917 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
PCDH17O14917 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH17O14917 AL356441.2-201ENST00000443009 864 ntBASIC21.94■■□□□ 1.1
PCDH17O14917 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH17O14917 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH17O14917 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH17O14917 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH17O14917 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PCDH17O14917 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH17O14917 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
PCDH17O14917 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH17O14917 AC092028.1-203ENST00000608262 953 ntBASIC21.93■■□□□ 1.1
PCDH17O14917 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PCDH17O14917 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH17O14917 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
PCDH17O14917 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH17O14917 AP003733.4-201ENST00000623785 1697 ntBASIC21.92■■□□□ 1.1
PCDH17O14917 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH17O14917 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH17O14917 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH17O14917 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH17O14917 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDH17O14917 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDH17O14917 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH17O14917 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH17O14917 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH17O14917 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH17O14917 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH17O14917 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH17O14917 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH17O14917 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH17O14917 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH17O14917 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDH17O14917 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH17O14917 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH17O14917 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH17O14917 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH17O14917 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH17O14917 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH17O14917 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH17O14917 AC019069.1-201ENST00000610008 1333 ntBASIC21.9■■□□□ 1.1
PCDH17O14917 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH17O14917 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH17O14917 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCDH17O14917 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH17O14917 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH17O14917 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms