Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDX4O14627 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDX4O14627 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDX4O14627 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDX4O14627 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.61■■□□□ 1.21
CDX4O14627 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDX4O14627 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.61■■□□□ 1.21
CDX4O14627 AC034268.1-201ENST00000441047 882 ntBASIC22.61■■□□□ 1.21
CDX4O14627 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.61■■□□□ 1.21
CDX4O14627 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.61■■□□□ 1.21
CDX4O14627 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.61■■□□□ 1.21
CDX4O14627 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.61■■□□□ 1.21
CDX4O14627 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDX4O14627 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDX4O14627 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.6■■□□□ 1.21
CDX4O14627 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDX4O14627 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDX4O14627 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.6■■□□□ 1.21
CDX4O14627 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.6■■□□□ 1.21
CDX4O14627 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.6■■□□□ 1.21
CDX4O14627 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.6■■□□□ 1.21
CDX4O14627 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDX4O14627 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDX4O14627 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
CDX4O14627 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDX4O14627 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDX4O14627 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CDX4O14627 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.59■■□□□ 1.21
CDX4O14627 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.58■■□□□ 1.21
CDX4O14627 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDX4O14627 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CDX4O14627 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.58■■□□□ 1.21
CDX4O14627 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.58■■□□□ 1.21
CDX4O14627 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.58■■□□□ 1.21
CDX4O14627 AL137784.2-201ENST00000607332 1000 ntBASIC22.58■■□□□ 1.21
CDX4O14627 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
CDX4O14627 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.58■■□□□ 1.2
CDX4O14627 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.57■■□□□ 1.2
CDX4O14627 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.57■■□□□ 1.2
CDX4O14627 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.57■■□□□ 1.2
CDX4O14627 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.57■■□□□ 1.2
CDX4O14627 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.57■■□□□ 1.2
CDX4O14627 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDX4O14627 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDX4O14627 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.56■■□□□ 1.2
CDX4O14627 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.56■■□□□ 1.2
CDX4O14627 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDX4O14627 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDX4O14627 AC092437.1-201ENST00000624794 1048 ntBASIC22.56■■□□□ 1.2
CDX4O14627 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDX4O14627 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.55■■□□□ 1.2
CDX4O14627 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.55■■□□□ 1.2
CDX4O14627 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDX4O14627 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDX4O14627 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDX4O14627 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDX4O14627 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.55■■□□□ 1.2
CDX4O14627 KRT18P5-201ENST00000436075 1291 ntBASIC22.55■■□□□ 1.2
CDX4O14627 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDX4O14627 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDX4O14627 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.55■■□□□ 1.2
CDX4O14627 AC136469.2-201ENST00000623944 1028 ntBASIC22.55■■□□□ 1.2
CDX4O14627 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.55■■□□□ 1.2
CDX4O14627 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.55■■□□□ 1.2
CDX4O14627 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDX4O14627 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDX4O14627 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDX4O14627 AC233992.3-201ENST00000607491 485 ntBASIC22.54■■□□□ 1.2
CDX4O14627 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
CDX4O14627 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDX4O14627 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDX4O14627 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
CDX4O14627 AC097639.1-201ENST00000565519 1891 ntBASIC22.54■■□□□ 1.2
CDX4O14627 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDX4O14627 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDX4O14627 AC009102.2-201ENST00000606772 1639 ntBASIC22.53■■□□□ 1.2
CDX4O14627 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CDX4O14627 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDX4O14627 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDX4O14627 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDX4O14627 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDX4O14627 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.53■■□□□ 1.2
CDX4O14627 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.53■■□□□ 1.2
CDX4O14627 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDX4O14627 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CDX4O14627 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDX4O14627 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CDX4O14627 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDX4O14627 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.52■■□□□ 1.2
CDX4O14627 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.52■■□□□ 1.2
CDX4O14627 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms