Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPK1AO00322 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPK1AO00322 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPK1AO00322 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.93■■□□□ 1.1
UPK1AO00322 ATP5G2P3-201ENST00000429083 425 ntBASIC21.93■■□□□ 1.1
UPK1AO00322 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.93■■□□□ 1.1
UPK1AO00322 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.93■■□□□ 1.1
UPK1AO00322 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
UPK1AO00322 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.93■■□□□ 1.1
UPK1AO00322 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.92■■□□□ 1.1
UPK1AO00322 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.92■■□□□ 1.1
UPK1AO00322 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.92■■□□□ 1.1
UPK1AO00322 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.92■■□□□ 1.1
UPK1AO00322 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
UPK1AO00322 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1AO00322 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
UPK1AO00322 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPK1AO00322 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPK1AO00322 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.91■■□□□ 1.1
UPK1AO00322 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPK1AO00322 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK1AO00322 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
UPK1AO00322 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK1AO00322 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPK1AO00322 ABCB10P4-201ENST00000566803 2184 ntBASIC21.9■■□□□ 1.1
UPK1AO00322 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK1AO00322 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPK1AO00322 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.9■■□□□ 1.1
UPK1AO00322 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
UPK1AO00322 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UPK1AO00322 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
UPK1AO00322 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 TSPY13P-201ENST00000338964 914 ntBASIC21.89■■□□□ 1.09
UPK1AO00322 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.89■■□□□ 1.09
UPK1AO00322 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1AO00322 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
UPK1AO00322 C9orf163-202ENST00000624034 2573 ntBASIC21.88■■□□□ 1.09
UPK1AO00322 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
UPK1AO00322 AL592295.1-201ENST00000400984 884 ntBASIC21.88■■□□□ 1.09
UPK1AO00322 AC139795.1-202ENST00000500444 432 ntBASIC21.88■■□□□ 1.09
UPK1AO00322 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.88■■□□□ 1.09
UPK1AO00322 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPK1AO00322 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.88■■□□□ 1.09
UPK1AO00322 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPK1AO00322 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1AO00322 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.87■■□□□ 1.09
UPK1AO00322 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1AO00322 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1AO00322 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
UPK1AO00322 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK1AO00322 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.86■■□□□ 1.09
UPK1AO00322 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1AO00322 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1AO00322 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
UPK1AO00322 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1AO00322 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.86■■□□□ 1.09
UPK1AO00322 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
UPK1AO00322 AC012354.3-201ENST00000623734 483 ntBASIC21.86■■□□□ 1.09
UPK1AO00322 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
UPK1AO00322 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1AO00322 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.86■■□□□ 1.09
UPK1AO00322 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPK1AO00322 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPK1AO00322 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.85■■□□□ 1.09
UPK1AO00322 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPK1AO00322 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPK1AO00322 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.85■■□□□ 1.09
UPK1AO00322 AC019171.1-201ENST00000601251 1056 ntBASIC21.85■■□□□ 1.09
UPK1AO00322 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
UPK1AO00322 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.85■■□□□ 1.09
UPK1AO00322 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPK1AO00322 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPK1AO00322 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPK1AO00322 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPK1AO00322 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPK1AO00322 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.84■■□□□ 1.09
UPK1AO00322 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.84■■□□□ 1.09
UPK1AO00322 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPK1AO00322 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.83■■□□□ 1.09
UPK1AO00322 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
UPK1AO00322 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms