Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.11■□□□□ 0.65
MSGN1A6NI15 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSGN1A6NI15 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSGN1A6NI15 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.1■□□□□ 0.65
MSGN1A6NI15 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSGN1A6NI15 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSGN1A6NI15 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
MSGN1A6NI15 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSGN1A6NI15 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSGN1A6NI15 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSGN1A6NI15 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.1■□□□□ 0.65
MSGN1A6NI15 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.1■□□□□ 0.65
MSGN1A6NI15 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MSGN1A6NI15 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
MSGN1A6NI15 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSGN1A6NI15 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSGN1A6NI15 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MSGN1A6NI15 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSGN1A6NI15 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.09■□□□□ 0.65
MSGN1A6NI15 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
MSGN1A6NI15 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.09■□□□□ 0.65
MSGN1A6NI15 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSGN1A6NI15 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSGN1A6NI15 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSGN1A6NI15 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
MSGN1A6NI15 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MSGN1A6NI15 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MSGN1A6NI15 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSGN1A6NI15 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MSGN1A6NI15 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.08■□□□□ 0.65
MSGN1A6NI15 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MSGN1A6NI15 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
MSGN1A6NI15 RP9P-202ENST00000450133 1212 ntBASIC19.08■□□□□ 0.64
MSGN1A6NI15 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.08■□□□□ 0.64
MSGN1A6NI15 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSGN1A6NI15 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSGN1A6NI15 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSGN1A6NI15 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MSGN1A6NI15 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSGN1A6NI15 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSGN1A6NI15 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
MSGN1A6NI15 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.07■□□□□ 0.64
MSGN1A6NI15 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.07■□□□□ 0.64
MSGN1A6NI15 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSGN1A6NI15 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.07■□□□□ 0.64
MSGN1A6NI15 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSGN1A6NI15 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MSGN1A6NI15 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.07■□□□□ 0.64
MSGN1A6NI15 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSGN1A6NI15 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
MSGN1A6NI15 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.06■□□□□ 0.64
MSGN1A6NI15 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSGN1A6NI15 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
MSGN1A6NI15 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.06■□□□□ 0.64
MSGN1A6NI15 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSGN1A6NI15 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MSGN1A6NI15 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSGN1A6NI15 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSGN1A6NI15 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSGN1A6NI15 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.05■□□□□ 0.64
MSGN1A6NI15 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
MSGN1A6NI15 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSGN1A6NI15 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MSGN1A6NI15 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSGN1A6NI15 AC093536.1-201ENST00000569153 554 ntBASIC19.05■□□□□ 0.64
MSGN1A6NI15 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.05■□□□□ 0.64
MSGN1A6NI15 AC007029.1-201ENST00000604183 313 ntBASIC19.05■□□□□ 0.64
MSGN1A6NI15 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MSGN1A6NI15 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.05■□□□□ 0.64
MSGN1A6NI15 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MSGN1A6NI15 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MSGN1A6NI15 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MSGN1A6NI15 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSGN1A6NI15 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
MSGN1A6NI15 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.04■□□□□ 0.64
MSGN1A6NI15 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.04■□□□□ 0.64
MSGN1A6NI15 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.04■□□□□ 0.64
MSGN1A6NI15 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.04■□□□□ 0.64
MSGN1A6NI15 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.04■□□□□ 0.64
MSGN1A6NI15 AL024507.2-201ENST00000606070 2574 ntBASIC19.04■□□□□ 0.64
MSGN1A6NI15 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.04■□□□□ 0.64
MSGN1A6NI15 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSGN1A6NI15 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.04■□□□□ 0.64
MSGN1A6NI15 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
MSGN1A6NI15 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.03■□□□□ 0.64
MSGN1A6NI15 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MSGN1A6NI15 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MSGN1A6NI15 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSGN1A6NI15 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSGN1A6NI15 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms