Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCOL1A6NCL2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 AC010997.5-201ENST00000609182 354 ntBASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.37■□□□□ 0.05
LRCOL1A6NCL2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRCOL1A6NCL2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 MTDHP2-201ENST00000601468 714 ntBASIC15.35■□□□□ 0.05
LRCOL1A6NCL2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCOL1A6NCL2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.34■□□□□ 0.05
LRCOL1A6NCL2 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCOL1A6NCL2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCOL1A6NCL2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCOL1A6NCL2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCOL1A6NCL2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.33■□□□□ 0.05
LRCOL1A6NCL2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRCOL1A6NCL2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC15.33■□□□□ 0.05
LRCOL1A6NCL2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCOL1A6NCL2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 SNX5-217ENST00000606557 1087 ntBASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 MIR6724-1-201ENST00000616420 92 ntBASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 MIR6724-2-201ENST00000616483 92 ntBASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 MIR6089-201ENST00000616698 64 ntBASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 MIR6724-4-201ENST00000617390 92 ntBASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 MIR6724-3-201ENST00000622482 92 ntBASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCOL1A6NCL2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRCOL1A6NCL2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCOL1A6NCL2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCOL1A6NCL2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.3■□□□□ 0.04
LRCOL1A6NCL2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCOL1A6NCL2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.3■□□□□ 0.04
LRCOL1A6NCL2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms