Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 DUX4L11-201ENST00000611504 1267 ntBASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 DUX4L12-201ENST00000614593 1267 ntBASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 DUX4L14-201ENST00000621227 1267 ntBASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV3S1A0A5B6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV3S1A0A5B6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.71■■□□□ 1.07
TCRBV3S1A0A5B6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV3S1A0A5B6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV3S1A0A5B6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.71■■□□□ 1.07
TCRBV3S1A0A5B6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV3S1A0A5B6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TCRBV3S1A0A5B6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TCRBV3S1A0A5B6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV3S1A0A5B6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV3S1A0A5B6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TCRBV3S1A0A5B6 AC127496.7-201ENST00000625110 1798 ntBASIC21.7■■□□□ 1.06
TCRBV3S1A0A5B6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV3S1A0A5B6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TCRBV3S1A0A5B6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.7■■□□□ 1.06
TCRBV3S1A0A5B6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV3S1A0A5B6 GUSBP5-202ENST00000510805 1989 ntBASIC21.69■■□□□ 1.06
TCRBV3S1A0A5B6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV3S1A0A5B6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV3S1A0A5B6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.69■■□□□ 1.06
TCRBV3S1A0A5B6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.69■■□□□ 1.06
TCRBV3S1A0A5B6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TCRBV3S1A0A5B6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV3S1A0A5B6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV3S1A0A5B6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV3S1A0A5B6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV3S1A0A5B6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV3S1A0A5B6 AC025884.2-201ENST00000553429 711 ntBASIC21.68■■□□□ 1.06
TCRBV3S1A0A5B6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV3S1A0A5B6 AC137767.1-201ENST00000602918 1920 ntBASIC21.68■■□□□ 1.06
TCRBV3S1A0A5B6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV3S1A0A5B6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
TCRBV3S1A0A5B6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV3S1A0A5B6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 ECEL1P1-201ENST00000373592 1742 ntBASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV3S1A0A5B6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV3S1A0A5B6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV3S1A0A5B6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV3S1A0A5B6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV3S1A0A5B6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TCRBV3S1A0A5B6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV3S1A0A5B6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TCRBV3S1A0A5B6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TCRBV3S1A0A5B6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.64■■□□□ 1.05
TCRBV3S1A0A5B6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBV3S1A0A5B6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TCRBV3S1A0A5B6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.64■■□□□ 1.05
TCRBV3S1A0A5B6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 FOXO3B-201ENST00000395675 1928 ntBASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 MIR3960-201ENST00000583311 91 ntBASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV3S1A0A5B6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 AL157400.5-201ENST00000507624 621 ntBASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV3S1A0A5B6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms