Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMEM238LA0A1B0GVL6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TMEM238LA0A1B0GVL6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 AC137767.1-201ENST00000602918 1920 ntBASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM238LA0A1B0GVL6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 AC233723.2-201ENST00000623798 2106 ntBASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM238LA0A1B0GVL6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 C1orf229-201ENST00000623686 2258 ntBASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM238LA0A1B0GVL6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM238LA0A1B0GVL6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 AC127496.7-201ENST00000625110 1798 ntBASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC16.1■□□□□ 0.17
TMEM238LA0A1B0GVL6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.09■□□□□ 0.17
TMEM238LA0A1B0GVL6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM238LA0A1B0GVL6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM238LA0A1B0GVL6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM238LA0A1B0GVL6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM238LA0A1B0GVL6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM238LA0A1B0GVL6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM238LA0A1B0GVL6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TMEM238LA0A1B0GVL6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms