Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.9■■□□□ 1.26
TRBV5-4A0A0C4DH59 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRBV5-4A0A0C4DH59 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.9■■□□□ 1.26
TRBV5-4A0A0C4DH59 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
TRBV5-4A0A0C4DH59 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRBV5-4A0A0C4DH59 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRBV5-4A0A0C4DH59 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
TRBV5-4A0A0C4DH59 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRBV5-4A0A0C4DH59 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
TRBV5-4A0A0C4DH59 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TRBV5-4A0A0C4DH59 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
TRBV5-4A0A0C4DH59 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.89■■□□□ 1.25
TRBV5-4A0A0C4DH59 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRBV5-4A0A0C4DH59 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRBV5-4A0A0C4DH59 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV5-4A0A0C4DH59 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.88■■□□□ 1.25
TRBV5-4A0A0C4DH59 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
TRBV5-4A0A0C4DH59 AL451085.2-201ENST00000605085 799 ntBASIC22.88■■□□□ 1.25
TRBV5-4A0A0C4DH59 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV5-4A0A0C4DH59 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV5-4A0A0C4DH59 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV5-4A0A0C4DH59 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRBV5-4A0A0C4DH59 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRBV5-4A0A0C4DH59 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
TRBV5-4A0A0C4DH59 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRBV5-4A0A0C4DH59 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
TRBV5-4A0A0C4DH59 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRBV5-4A0A0C4DH59 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRBV5-4A0A0C4DH59 AL022069.1-201ENST00000568025 1636 ntBASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 AC004812.2-201ENST00000611079 2094 ntBASIC22.86■■□□□ 1.25
TRBV5-4A0A0C4DH59 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRBV5-4A0A0C4DH59 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 AC009299.2-201ENST00000482477 511 ntBASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 AC021242.3-201ENST00000607598 1377 ntBASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRBV5-4A0A0C4DH59 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRBV5-4A0A0C4DH59 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.83■■□□□ 1.24
TRBV5-4A0A0C4DH59 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 Z92544.1-202ENST00000571933 1220 ntBASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRBV5-4A0A0C4DH59 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 BX664725.1-201ENST00000438252 379 ntBASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 AC004448.1-201ENST00000458332 883 ntBASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRBV5-4A0A0C4DH59 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.8■■□□□ 1.24
TRBV5-4A0A0C4DH59 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRBV5-4A0A0C4DH59 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRBV5-4A0A0C4DH59 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRBV5-4A0A0C4DH59 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRBV5-4A0A0C4DH59 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TRBV5-4A0A0C4DH59 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
TRBV5-4A0A0C4DH59 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TRBV5-4A0A0C4DH59 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.79■■□□□ 1.24
TRBV5-4A0A0C4DH59 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms