Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV21A0A0B4J279 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 AC068473.5-201ENST00000616428 2072 ntBASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 GPX1-201ENST00000419349 1106 ntBASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV21A0A0B4J279 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV21A0A0B4J279 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV21A0A0B4J279 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV21A0A0B4J279 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV21A0A0B4J279 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV21A0A0B4J279 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 PKD1P6-201ENST00000343738 4769 ntBASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV21A0A0B4J279 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV21A0A0B4J279 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 AC133552.2-201ENST00000619106 1032 ntBASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV21A0A0B4J279 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 MIR4449-201ENST00000578365 66 ntBASIC17.05■□□□□ 0.32
TRAV21A0A0B4J279 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms