Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV20A0A0B4J274 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV20A0A0B4J274 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAV20A0A0B4J274 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV20A0A0B4J274 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.47■□□□□ 0.71
TRAV20A0A0B4J274 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV20A0A0B4J274 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV20A0A0B4J274 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV20A0A0B4J274 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV20A0A0B4J274 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV20A0A0B4J274 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV20A0A0B4J274 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV20A0A0B4J274 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 MTDHP2-201ENST00000601468 714 ntBASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 AC010997.5-201ENST00000609182 354 ntBASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRAV20A0A0B4J274 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV20A0A0B4J274 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRAV20A0A0B4J274 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV20A0A0B4J274 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV20A0A0B4J274 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV20A0A0B4J274 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV20A0A0B4J274 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV20A0A0B4J274 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRAV20A0A0B4J274 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV20A0A0B4J274 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV20A0A0B4J274 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV20A0A0B4J274 FOXO3B-201ENST00000395675 1928 ntBASIC19.4■□□□□ 0.7
TRAV20A0A0B4J274 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV20A0A0B4J274 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV20A0A0B4J274 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TRAV20A0A0B4J274 RNF165-205ENST00000588679 2904 ntBASIC19.39■□□□□ 0.7
TRAV20A0A0B4J274 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV20A0A0B4J274 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 MIR6724-1-201ENST00000616420 92 ntBASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 MIR6724-2-201ENST00000616483 92 ntBASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 MIR6724-4-201ENST00000617390 92 ntBASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 MIR6724-3-201ENST00000622482 92 ntBASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV20A0A0B4J274 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms