Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 AL031848.2-201ENST00000607670 837 ntBASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV2A0A0B4J234 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV2A0A0B4J234 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV2A0A0B4J234 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV2A0A0B4J234 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV2A0A0B4J234 AL139125.2-201ENST00000623134 1869 ntBASIC17.39■□□□□ 0.37
TRAV2A0A0B4J234 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV2A0A0B4J234 KRT8P33-201ENST00000508125 1423 ntBASIC17.38■□□□□ 0.37
TRAV2A0A0B4J234 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV2A0A0B4J234 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV2A0A0B4J234 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV2A0A0B4J234 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV2A0A0B4J234 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV2A0A0B4J234 HLA-L-211ENST00000482052 1765 ntBASIC17.38■□□□□ 0.37
TRAV2A0A0B4J234 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV2A0A0B4J234 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV2A0A0B4J234 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV2A0A0B4J234 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV2A0A0B4J234 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV2A0A0B4J234 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV2A0A0B4J234 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV2A0A0B4J234 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 LINC00543-201ENST00000567234 1845 ntBASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV2A0A0B4J234 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV2A0A0B4J234 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 AC137630.3-201ENST00000607245 391 ntBASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRAV2A0A0B4J234 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV2A0A0B4J234 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV2A0A0B4J234 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV2A0A0B4J234 AL022069.1-201ENST00000568025 1636 ntBASIC17.33■□□□□ 0.37
TRAV2A0A0B4J234 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAV2A0A0B4J234 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV2A0A0B4J234 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV2A0A0B4J234 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV2A0A0B4J234 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV2A0A0B4J234 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAV2A0A0B4J234 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAV2A0A0B4J234 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV2A0A0B4J234 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV2A0A0B4J234 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV2A0A0B4J234 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV2A0A0B4J234 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV2A0A0B4J234 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV2A0A0B4J234 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV2A0A0B4J234 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV2A0A0B4J234 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV2A0A0B4J234 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 RARRES2P1-201ENST00000474487 481 ntBASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 AF131216.4-201ENST00000638924 1588 ntBASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV2A0A0B4J234 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms