Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-1A0A0A6YYK1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 FOXO3B-201ENST00000395675 1928 ntBASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-1A0A0A6YYK1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 ABHD17AP4-201ENST00000411545 909 ntBASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRAV8-1A0A0A6YYK1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-1A0A0A6YYK1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 AC092296.2-201ENST00000589470 999 ntBASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV8-1A0A0A6YYK1 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.46■□□□□ 0.38
TRAV8-1A0A0A6YYK1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 CLDN5-201ENST00000403084 2357 ntBASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 RP9P-202ENST00000450133 1212 ntBASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-1A0A0A6YYK1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 AC093536.1-201ENST00000569153 554 ntBASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV8-1A0A0A6YYK1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV8-1A0A0A6YYK1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-1A0A0A6YYK1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-1A0A0A6YYK1 AL117328.2-201ENST00000624617 1940 ntBASIC17.43■□□□□ 0.38
TRAV8-1A0A0A6YYK1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-1A0A0A6YYK1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms