Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV9-1A0A075B6T8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV9-1A0A075B6T8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV9-1A0A075B6T8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV9-1A0A075B6T8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV9-1A0A075B6T8 AC092068.2-201ENST00000590491 1708 ntBASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 ANOS2P-203ENST00000472227 1816 ntBASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-1A0A075B6T8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 AL391121.1-201ENST00000607967 1349 ntBASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 AC242852.2-201ENST00000615738 1807 ntBASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-1A0A075B6T8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV9-1A0A075B6T8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-1A0A075B6T8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-1A0A075B6T8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-1A0A075B6T8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAV9-1A0A075B6T8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-1A0A075B6T8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAV9-1A0A075B6T8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-1A0A075B6T8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-1A0A075B6T8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-1A0A075B6T8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV9-1A0A075B6T8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV9-1A0A075B6T8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV9-1A0A075B6T8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV9-1A0A075B6T8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRAV9-1A0A075B6T8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV9-1A0A075B6T8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV9-1A0A075B6T8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-1A0A075B6T8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms