Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV25-1A0A075B6N4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV25-1A0A075B6N4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRBV25-1A0A075B6N4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 EP400NL-214ENST00000641289 2402 ntBASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV25-1A0A075B6N4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRBV25-1A0A075B6N4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.52■□□□□ 0.23
TRBV25-1A0A075B6N4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.52■□□□□ 0.23
TRBV25-1A0A075B6N4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV25-1A0A075B6N4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV25-1A0A075B6N4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 MIR639-201ENST00000384974 98 ntBASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV25-1A0A075B6N4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 AC092296.2-201ENST00000589470 999 ntBASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV25-1A0A075B6N4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV25-1A0A075B6N4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV25-1A0A075B6N4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV25-1A0A075B6N4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV25-1A0A075B6N4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV25-1A0A075B6N4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRBV25-1A0A075B6N4 SLC6A10P-202ENST00000431994 2058 ntBASIC16.49■□□□□ 0.23
TRBV25-1A0A075B6N4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 ECEL1P2-201ENST00000461596 1295 ntBASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 AC022413.1-201ENST00000624602 984 ntBASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms