Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 KRT18P28-201ENST00000453838 1332 ntBASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 AC067750.1-201ENST00000608826 6545 ntBASIC14.83□□□□□ -0.04
AP4B1Q9Y6B7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 TSEN15P1-201ENST00000423257 515 ntBASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 HLA-J-203ENST00000494367 1087 ntBASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 AC092135.3-201ENST00000624151 1846 ntBASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 AP001282.1-201ENST00000531301 1499 ntBASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4B1Q9Y6B7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 AC142381.1-201ENST00000426099 345 ntBASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 FAM58DP-201ENST00000428076 619 ntBASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 AC093724.1-201ENST00000448659 1027 ntBASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4B1Q9Y6B7 AC098859.1-201ENST00000502915 1238 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms