Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC018735.1-201ENST00000437208 1502 ntBASIC20.73■□□□□ 0.91
NINLQ9Y2I6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 AC023024.2-201ENST00000623561 1993 ntBASIC20.73■□□□□ 0.91
NINLQ9Y2I6 SSR4P1-203ENST00000599569 2260 ntBASIC20.73■□□□□ 0.91
NINLQ9Y2I6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 AC092384.3-202ENST00000564646 2873 ntBASIC20.73■□□□□ 0.91
NINLQ9Y2I6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.73■□□□□ 0.91
NINLQ9Y2I6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 TMEM198B-204ENST00000484016 896 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 ALG3P1-201ENST00000508806 1114 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 KRT8P4-201ENST00000509735 1454 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 FKBP4P6-201ENST00000457486 1332 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AC010141.1-201ENST00000411585 623 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AC104982.3-201ENST00000581995 514 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 AC011840.2-201ENST00000563063 1520 ntBASIC20.72■□□□□ 0.91
NINLQ9Y2I6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 AC126177.1-201ENST00000547829 2218 ntBASIC20.71■□□□□ 0.91
NINLQ9Y2I6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 AP001258.2-201ENST00000529891 490 ntBASIC20.71■□□□□ 0.91
NINLQ9Y2I6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.71■□□□□ 0.91
NINLQ9Y2I6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms