Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 FTLP1-201ENST00000449155 526 ntBASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 AC104982.3-201ENST00000581995 514 ntBASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 AC091812.3-201ENST00000621362 345 ntBASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS5Q9UPZ3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AC148477.4-201ENST00000613430 1793 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 RPL5P21-201ENST00000404620 815 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 C2orf27AP3-201ENST00000434123 579 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 MAGEA5-201ENST00000446757 942 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 FTLP10-202ENST00000505798 471 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 MIR4741-201ENST00000579822 90 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 EEF1DP1-201ENST00000585891 896 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AC025181.2-201ENST00000606994 802 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 INTS4P2-202ENST00000614726 2019 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AP003419.4-201ENST00000616071 517 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AL354718.3-201ENST00000616414 581 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 CR382287.1-201ENST00000623954 586 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 HLA-C-210ENST00000640219 976 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AL596257.1-201ENST00000641463 2694 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AHCYP2-201ENST00000430630 1300 ntBASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS5Q9UPZ3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.18■□□□□ 0.5
HPS5Q9UPZ3 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms