Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 RPL13AP20-201ENST00000459725 609 ntBASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 AC023310.1-201ENST00000554836 735 ntBASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDZRN3Q9UPQ7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 AC093433.1-201ENST00000458048 571 ntBASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 SLED1-202ENST00000512051 380 ntBASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 AC091271.1-201ENST00000611877 1162 ntBASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.73■□□□□ 0.75
PDZRN3Q9UPQ7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms