Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC3Q9UN70 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 ACTBP8-201ENST00000403258 1108 ntBASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 AC022137.2-201ENST00000503482 481 ntBASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGC3Q9UN70 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms