Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AC004066.1-201ENST00000502488 802 ntBASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AL391069.4-201ENST00000609583 481 ntBASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AC004840.1-201ENST00000636359 365 ntBASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 CICP14-201ENST00000629111 2732 ntBASIC14.72□□□□□ -0.05
VPS29Q9UBQ0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 AC232323.1-201ENST00000540724 2099 ntBASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 AL589987.1-201ENST00000453380 819 ntBASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 SPDYE18-201ENST00000510091 1050 ntBASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 AC097376.2-205ENST00000610159 5334 ntBASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS29Q9UBQ0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS29Q9UBQ0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS29Q9UBQ0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms