Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 SPDYE22P-201ENST00000582158 798 ntBASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 AC004790.1-201ENST00000612686 536 ntBASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 AC007431.3-201ENST00000623221 587 ntBASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 AL645728.2-202ENST00000641679 227 ntBASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 AC098614.1-201ENST00000368528 745 ntBASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 AC092552.1-201ENST00000547243 906 ntBASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 CHCHD2P3-201ENST00000603038 451 ntBASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 AC093813.1-201ENST00000605066 256 ntBASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PARPBPQ9NWS1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.77□□□□□ -0.2
PARPBPQ9NWS1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.77□□□□□ -0.21
PARPBPQ9NWS1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms