Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 AC069224.1-201ENST00000566372 1715 ntBASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 EEF1DP4-201ENST00000446006 880 ntBASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 ZNF767P-206ENST00000513792 565 ntBASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 C2orf69P2-201ENST00000562032 1123 ntBASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 AC120045.2-201ENST00000567334 178 ntBASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 RHOXF1P1-202ENST00000635473 501 ntBASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF3Q9NR81 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AC134312.5-201ENST00000568031 1313 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AC020658.6-201ENST00000623564 1870 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 ELK2AP-201ENST00000392510 1007 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AC074338.1-201ENST00000416825 156 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AC026954.1-201ENST00000429771 1293 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AC006033.1-201ENST00000440505 426 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AC012441.1-201ENST00000446669 685 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 KRT90P-201ENST00000549264 1064 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 RHOQP1-201ENST00000555758 579 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 CLUHP6-201ENST00000580789 941 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AL049840.4-201ENST00000602422 811 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 LINC01144-201ENST00000626198 1710 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 TMBIM7P-203ENST00000641617 1718 ntBASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF3Q9NR81 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms