Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 AC016694.1-201ENST00000434179 700 ntBASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 AP000812.2-201ENST00000538934 718 ntBASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 RAB43P1-201ENST00000561790 589 ntBASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 AC023090.2-201ENST00000625182 2110 ntBASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 PDIA3P1-201ENST00000471856 1510 ntBASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KCNMB3Q9NPA1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 ANKRD19P-201ENST00000338192 862 ntBASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 MIR1909-201ENST00000411312 80 ntBASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 POM121L8P-201ENST00000417732 1281 ntBASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 ARSEP1-201ENST00000420443 635 ntBASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 POM121L9P-203ENST00000441984 1285 ntBASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 HILS1-202ENST00000545329 423 ntBASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 AC099063.4-201ENST00000641099 1602 ntBASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNMB3Q9NPA1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 BOLA2P3-201ENST00000404566 256 ntBASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 AC245100.3-201ENST00000441281 285 ntBASIC17.09■□□□□ 0.33
KCNMB3Q9NPA1 GPR53P-205ENST00000457298 1084 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms