Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 TSPY16P-201ENST00000449843 468 ntBASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 AL133215.2-201ENST00000609242 977 ntBASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TUBA1CQ9BQE3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 AC004890.2-204ENST00000481968 304 ntBASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TUBA1CQ9BQE3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms