Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 AC243562.2-201ENST00000561247 970 ntBASIC14.33□□□□□ -0.12
TM9SF2Q99805 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 AC239800.4-201ENST00000603712 296 ntBASIC14.33□□□□□ -0.12
TM9SF2Q99805 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.33□□□□□ -0.12
TM9SF2Q99805 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.33□□□□□ -0.12
TM9SF2Q99805 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.33□□□□□ -0.12
TM9SF2Q99805 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.33□□□□□ -0.12
TM9SF2Q99805 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 LINC00528-201ENST00000600723 2160 ntBASIC14.33□□□□□ -0.12
TM9SF2Q99805 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TM9SF2Q99805 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.33□□□□□ -0.12
TM9SF2Q99805 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AC007191.1-201ENST00000623179 2995 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 CYP4F24P-201ENST00000586049 1580 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AC004987.2-201ENST00000395959 1148 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AL353779.1-201ENST00000434793 351 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AC005225.4-201ENST00000557330 545 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 AC044860.1-202ENST00000559481 777 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 SPDYE22P-201ENST00000582158 798 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AL662799.1-202ENST00000614205 422 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 AL391825.1-201ENST00000457671 1364 ntBASIC14.32□□□□□ -0.12
TM9SF2Q99805 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TM9SF2Q99805 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TM9SF2Q99805 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TM9SF2Q99805 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.31□□□□□ -0.12
TM9SF2Q99805 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TM9SF2Q99805 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TM9SF2Q99805 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.31□□□□□ -0.12
TM9SF2Q99805 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms