Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC10.21□□□□□ -0.78
LITAFQ99732 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.21□□□□□ -0.78
LITAFQ99732 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.21□□□□□ -0.78
LITAFQ99732 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LITAFQ99732 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.2□□□□□ -0.78
LITAFQ99732 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
LITAFQ99732 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.2□□□□□ -0.78
LITAFQ99732 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC10.2□□□□□ -0.78
LITAFQ99732 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 LILRP1-201ENST00000444199 1370 ntBASIC10.2□□□□□ -0.78
LITAFQ99732 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.2□□□□□ -0.78
LITAFQ99732 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC10.2□□□□□ -0.78
LITAFQ99732 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.2□□□□□ -0.78
LITAFQ99732 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
LITAFQ99732 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
LITAFQ99732 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
LITAFQ99732 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LITAFQ99732 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LITAFQ99732 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 CES1P1-201ENST00000421606 1704 ntBASIC10.19□□□□□ -0.78
LITAFQ99732 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.19□□□□□ -0.78
LITAFQ99732 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LITAFQ99732 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.19□□□□□ -0.78
LITAFQ99732 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
LITAFQ99732 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms