Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC120045.2-201ENST00000567334 178 ntBASIC18.14■□□□□ 0.49
NEK1Q96PY6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 AL035252.4-201ENST00000624174 288 ntBASIC18.14■□□□□ 0.49
NEK1Q96PY6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 AL359711.2-201ENST00000563105 872 ntBASIC18.13■□□□□ 0.49
NEK1Q96PY6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 AC063926.2-201ENST00000623766 1308 ntBASIC18.13■□□□□ 0.49
NEK1Q96PY6 AC063926.3-201ENST00000624734 5658 ntBASIC18.13■□□□□ 0.49
NEK1Q96PY6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 LILRP1-201ENST00000444199 1370 ntBASIC18.13■□□□□ 0.49
NEK1Q96PY6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 REXO1L5P-201ENST00000622260 2098 ntBASIC18.13■□□□□ 0.49
NEK1Q96PY6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NEK1Q96PY6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NEK1Q96PY6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 MYCLP2-201ENST00000449268 967 ntBASIC18.12■□□□□ 0.49
NEK1Q96PY6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 AC124283.3-201ENST00000570869 594 ntBASIC18.12■□□□□ 0.49
NEK1Q96PY6 TMEM261P1-201ENST00000604899 340 ntBASIC18.12■□□□□ 0.49
NEK1Q96PY6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.12■□□□□ 0.49
NEK1Q96PY6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEK1Q96PY6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NEK1Q96PY6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEK1Q96PY6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms