Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.5■□□□□ 0.23
LRCH3Q96II8 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 RPL8P2-201ENST00000430538 502 ntBASIC16.5■□□□□ 0.23
LRCH3Q96II8 AC114812.1-204ENST00000449669 728 ntBASIC16.5■□□□□ 0.23
LRCH3Q96II8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 AC011247.3-201ENST00000603297 438 ntBASIC16.5■□□□□ 0.23
LRCH3Q96II8 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRCH3Q96II8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH3Q96II8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AL645728.1-201ENST00000366221 2101 ntBASIC16.49■□□□□ 0.23
LRCH3Q96II8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH3Q96II8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH3Q96II8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH3Q96II8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH3Q96II8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms