Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AP002414.2-201ENST00000591780 3365 ntBASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 KRT8P22-201ENST00000562317 1415 ntBASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AL139094.1-201ENST00000405549 1188 ntBASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 FAM207CP-201ENST00000443486 507 ntBASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC027796.2-201ENST00000575326 344 ntBASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM5Q96HC4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 NORAD-201ENST00000565493 5339 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 AC087499.6-201ENST00000411576 835 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 SERBP1P5-201ENST00000510079 1181 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 DUX4L47-201ENST00000566374 394 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 AC124283.3-201ENST00000570869 594 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 AL603764.1-201ENST00000636452 321 ntBASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.93□□□□□ -0.02
PDLIM5Q96HC4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms