Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 ACKR1-201ENST00000368121 1240 ntBASIC13.47□□□□□ -0.25
TMEM54Q969K7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 AP001063.1-201ENST00000568332 529 ntBASIC13.47□□□□□ -0.25
TMEM54Q969K7 AC138761.1-201ENST00000584393 385 ntBASIC13.47□□□□□ -0.25
TMEM54Q969K7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 AP005019.2-201ENST00000615104 511 ntBASIC13.47□□□□□ -0.25
TMEM54Q969K7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 AL033527.5-201ENST00000641382 801 ntBASIC13.47□□□□□ -0.25
TMEM54Q969K7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM54Q969K7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM54Q969K7 AL513477.1-201ENST00000602865 2407 ntBASIC13.47□□□□□ -0.25
TMEM54Q969K7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 CICP24-201ENST00000605464 2705 ntBASIC13.46□□□□□ -0.25
TMEM54Q969K7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 KLF2P2-201ENST00000416807 1039 ntBASIC13.46□□□□□ -0.25
TMEM54Q969K7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.46□□□□□ -0.25
TMEM54Q969K7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TMEM54Q969K7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM54Q969K7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM54Q969K7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM54Q969K7 AL137783.1-201ENST00000623494 1896 ntBASIC13.46□□□□□ -0.26
TMEM54Q969K7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM54Q969K7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM54Q969K7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.46□□□□□ -0.26
TMEM54Q969K7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.46□□□□□ -0.26
TMEM54Q969K7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.46□□□□□ -0.26
TMEM54Q969K7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM54Q969K7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM54Q969K7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM54Q969K7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM54Q969K7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TMEM54Q969K7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 AC067930.6-201ENST00000623257 4947 ntBASIC13.45□□□□□ -0.26
TMEM54Q969K7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms