Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP6NLQ92738 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.24■□□□□ 0.35
USP6NLQ92738 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP6NLQ92738 AC055811.4-201ENST00000624039 1754 ntBASIC17.24■□□□□ 0.35
USP6NLQ92738 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP6NLQ92738 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP6NLQ92738 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP6NLQ92738 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP6NLQ92738 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP6NLQ92738 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP6NLQ92738 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP6NLQ92738 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USP6NLQ92738 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.23■□□□□ 0.35
USP6NLQ92738 DOC2GP-204ENST00000639052 2548 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP6NLQ92738 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USP6NLQ92738 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 AC106794.1-201ENST00000506935 792 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
USP6NLQ92738 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.23■□□□□ 0.35
USP6NLQ92738 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.23■□□□□ 0.35
USP6NLQ92738 MIR4683-201ENST00000579659 81 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 AC009955.4-201ENST00000597192 544 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.23■□□□□ 0.35
USP6NLQ92738 AL358472.3-201ENST00000608147 415 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 MIR7845-201ENST00000618396 99 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 AL353726.2-201ENST00000623259 884 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 AL513523.2-202ENST00000427283 2040 ntBASIC17.23■□□□□ 0.35
USP6NLQ92738 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.23■□□□□ 0.35
USP6NLQ92738 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
USP6NLQ92738 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP6NLQ92738 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
USP6NLQ92738 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.22■□□□□ 0.35
USP6NLQ92738 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.22■□□□□ 0.35
USP6NLQ92738 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.22■□□□□ 0.35
USP6NLQ92738 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.22■□□□□ 0.35
USP6NLQ92738 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
USP6NLQ92738 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.22■□□□□ 0.35
USP6NLQ92738 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.22■□□□□ 0.35
USP6NLQ92738 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.22■□□□□ 0.35
USP6NLQ92738 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.22■□□□□ 0.35
USP6NLQ92738 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.22■□□□□ 0.35
USP6NLQ92738 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.22■□□□□ 0.35
USP6NLQ92738 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP6NLQ92738 AC006480.2-201ENST00000609770 1337 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms