Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 AC022447.6-201ENST00000515522 438 ntBASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 CR383656.2-201ENST00000548656 2254 ntBASIC12.06□□□□□ -0.48
MBD3L1Q8WWY6 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 REXO1L4P-201ENST00000605109 1937 ntBASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 AC108073.2-201ENST00000464002 357 ntBASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 AC073389.1-201ENST00000595595 795 ntBASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 NPAP1P7-201ENST00000613027 823 ntBASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 AL354702.1-201ENST00000442006 1960 ntBASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MBD3L1Q8WWY6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AC090505.1-201ENST00000430515 1834 ntBASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AC073548.1-201ENST00000624088 1882 ntBASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms