Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 RHOQP3-201ENST00000437982 621 ntBASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 VN2R19P-201ENST00000442399 1052 ntBASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 AC022447.6-201ENST00000515522 438 ntBASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 RNA5SP410-201ENST00000516285 106 ntBASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 AF238378.1-201ENST00000526806 358 ntBASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AC104457.1-201ENST00000401024 814 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AZGP1P1-201ENST00000411909 902 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AC108751.1-201ENST00000490852 363 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AC012640.2-201ENST00000561606 901 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AC096734.2-201ENST00000562054 433 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AL138918.1-201ENST00000568306 659 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AC117500.6-201ENST00000624871 588 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 AC010507.1-201ENST00000633895 436 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms