Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 PRAL-201ENST00000624952 3286 ntBASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.54■□□□□ 0.4
U2AF1L4Q8WU68 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 LINC00554-201ENST00000564841 3011 ntBASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 NKAIN1P1-201ENST00000435754 582 ntBASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 AC079336.7-201ENST00000623428 1078 ntBASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2AF1L4Q8WU68 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 MIR4750-201ENST00000584564 56 ntBASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.52■□□□□ 0.4
U2AF1L4Q8WU68 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 AL354989.2-201ENST00000435838 1540 ntBASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2AF1L4Q8WU68 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2AF1L4Q8WU68 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
U2AF1L4Q8WU68 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2AF1L4Q8WU68 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2AF1L4Q8WU68 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2AF1L4Q8WU68 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2AF1L4Q8WU68 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2AF1L4Q8WU68 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms