Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 RPL13AP23-201ENST00000480739 586 ntBASIC14.96□□□□□ -0.01
RNF217Q8TC41 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 AL009183.1-201ENST00000603760 355 ntBASIC14.96□□□□□ -0.01
RNF217Q8TC41 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF217Q8TC41 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF217Q8TC41 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF217Q8TC41 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF217Q8TC41 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF217Q8TC41 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.96□□□□□ -0.02
RNF217Q8TC41 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
RNF217Q8TC41 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF217Q8TC41 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.96□□□□□ -0.02
RNF217Q8TC41 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.96□□□□□ -0.02
RNF217Q8TC41 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 MIR648-201ENST00000385046 94 ntBASIC14.95□□□□□ -0.02
RNF217Q8TC41 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.95□□□□□ -0.02
RNF217Q8TC41 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 MIR3909-201ENST00000579518 119 ntBASIC14.95□□□□□ -0.02
RNF217Q8TC41 RN7SL275P-201ENST00000582762 335 ntBASIC14.95□□□□□ -0.02
RNF217Q8TC41 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 AC016027.1-202ENST00000607927 1699 ntBASIC14.95□□□□□ -0.02
RNF217Q8TC41 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF217Q8TC41 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF217Q8TC41 AC089987.1-201ENST00000551654 2209 ntBASIC14.94□□□□□ -0.02
RNF217Q8TC41 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF217Q8TC41 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF217Q8TC41 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF217Q8TC41 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF217Q8TC41 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms