Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC16Q8NEE8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC16Q8NEE8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TTC16Q8NEE8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC16Q8NEE8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 AC007551.1-201ENST00000457394 519 ntBASIC16.17■□□□□ 0.18
TTC16Q8NEE8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 FTH1P14-201ENST00000482930 551 ntBASIC16.17■□□□□ 0.18
TTC16Q8NEE8 AC092658.1-201ENST00000505836 891 ntBASIC16.17■□□□□ 0.18
TTC16Q8NEE8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.17■□□□□ 0.18
TTC16Q8NEE8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 MTHFR-217ENST00000641820 1569 ntBASIC16.17■□□□□ 0.18
TTC16Q8NEE8 AC093525.8-201ENST00000624099 1342 ntBASIC16.17■□□□□ 0.18
TTC16Q8NEE8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC16Q8NEE8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 AC244669.2-201ENST00000612320 853 ntBASIC16.16■□□□□ 0.18
TTC16Q8NEE8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC16Q8NEE8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC16Q8NEE8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms