Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 AL118508.1-201ENST00000613502 2345 ntBASIC12.04□□□□□ -0.48
C3orf56Q8N813 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 ACTBP8-201ENST00000403258 1108 ntBASIC12.04□□□□□ -0.48
C3orf56Q8N813 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 AC012618.1-201ENST00000461223 412 ntBASIC12.04□□□□□ -0.48
C3orf56Q8N813 AC104784.1-201ENST00000473096 294 ntBASIC12.04□□□□□ -0.48
C3orf56Q8N813 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 AC024681.1-201ENST00000521917 487 ntBASIC12.04□□□□□ -0.48
C3orf56Q8N813 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.04□□□□□ -0.48
C3orf56Q8N813 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
C3orf56Q8N813 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 KLF2P2-201ENST00000416807 1039 ntBASIC12.03□□□□□ -0.48
C3orf56Q8N813 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 PGAM1P5-201ENST00000548011 764 ntBASIC12.03□□□□□ -0.48
C3orf56Q8N813 PPY2P-201ENST00000582808 702 ntBASIC12.03□□□□□ -0.48
C3orf56Q8N813 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
C3orf56Q8N813 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.03□□□□□ -0.48
C3orf56Q8N813 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms