Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 SOCS2P1-201ENST00000417727 557 ntBASIC14.74□□□□□ -0.05
RAB43Q86YS6 AC136604.1-201ENST00000418535 575 ntBASIC14.74□□□□□ -0.05
RAB43Q86YS6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 BTNL10-201ENST00000595971 695 ntBASIC14.74□□□□□ -0.05
RAB43Q86YS6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 AC233724.13-201ENST00000598383 410 ntBASIC14.74□□□□□ -0.05
RAB43Q86YS6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.74□□□□□ -0.05
RAB43Q86YS6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 AC134407.2-201ENST00000625089 1978 ntBASIC14.74□□□□□ -0.05
RAB43Q86YS6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 GRK6P1-201ENST00000400595 1711 ntBASIC14.74□□□□□ -0.05
RAB43Q86YS6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
RAB43Q86YS6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB43Q86YS6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 MIR648-201ENST00000385046 94 ntBASIC14.73□□□□□ -0.05
RAB43Q86YS6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 KRT223P-202ENST00000449164 1292 ntBASIC14.73□□□□□ -0.05
RAB43Q86YS6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.73□□□□□ -0.05
RAB43Q86YS6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 ENPP7P5-201ENST00000541031 1031 ntBASIC14.73□□□□□ -0.05
RAB43Q86YS6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.73□□□□□ -0.05
RAB43Q86YS6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 MYO15B-237ENST00000642007 4893 ntBASIC14.73□□□□□ -0.05
RAB43Q86YS6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 INTS4P2-202ENST00000614726 2019 ntBASIC14.73□□□□□ -0.05
RAB43Q86YS6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB43Q86YS6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms