Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.92■□□□□ 0.14
CCDC25Q86WR0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 AC079140.1-201ENST00000508039 487 ntBASIC15.92■□□□□ 0.14
CCDC25Q86WR0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 KRT8P48-201ENST00000515599 1220 ntBASIC15.92■□□□□ 0.14
CCDC25Q86WR0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 AC092902.6-201ENST00000641783 218 ntBASIC15.92■□□□□ 0.14
CCDC25Q86WR0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 AC041040.2-201ENST00000622926 2899 ntBASIC15.92■□□□□ 0.14
CCDC25Q86WR0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC25Q86WR0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC25Q86WR0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 TIMM8BP1-201ENST00000452384 211 ntBASIC15.9■□□□□ 0.14
CCDC25Q86WR0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC25Q86WR0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms