Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 SERBP1P3-201ENST00000459980 809 ntBASIC13.62□□□□□ -0.23
RTTNQ86VV8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.62□□□□□ -0.23
RTTNQ86VV8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTTNQ86VV8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTTNQ86VV8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.61□□□□□ -0.23
RTTNQ86VV8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms