Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 MEIS3P1-201ENST00000495167 958 ntBASIC14.17□□□□□ -0.14
ZNF550Q7Z398 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.17□□□□□ -0.14
ZNF550Q7Z398 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF550Q7Z398 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 AC067750.1-201ENST00000608826 6545 ntBASIC14.16□□□□□ -0.14
ZNF550Q7Z398 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 AC104794.3-201ENST00000566840 1248 ntBASIC14.16□□□□□ -0.14
ZNF550Q7Z398 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 AC027307.3-201ENST00000594262 1100 ntBASIC14.16□□□□□ -0.14
ZNF550Q7Z398 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 AC013726.1-201ENST00000563747 2285 ntBASIC14.16□□□□□ -0.14
ZNF550Q7Z398 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF550Q7Z398 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 AC063926.2-201ENST00000623766 1308 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 AC104457.1-201ENST00000401024 814 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 GNAQP1-201ENST00000444815 1067 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms