Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 FO393414.2-201ENST00000405153 598 ntBASIC13.93□□□□□ -0.18
SHFQ7M4L6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 AC005237.2-201ENST00000434368 219 ntBASIC13.93□□□□□ -0.18
SHFQ7M4L6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.93□□□□□ -0.18
SHFQ7M4L6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHFQ7M4L6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 PGAM5P1-201ENST00000518923 814 ntBASIC13.92□□□□□ -0.18
SHFQ7M4L6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHFQ7M4L6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 ELL2P1-201ENST00000413990 1906 ntBASIC13.92□□□□□ -0.18
SHFQ7M4L6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.92□□□□□ -0.18
SHFQ7M4L6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 AC067750.1-201ENST00000608826 6545 ntBASIC13.91□□□□□ -0.18
SHFQ7M4L6 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms