Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 PMS2P2-201ENST00000425039 1128 ntBASIC14.27□□□□□ -0.13
TUBA1AQ71U36 FAM8A3P-201ENST00000427218 844 ntBASIC14.27□□□□□ -0.13
TUBA1AQ71U36 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 HLA-J-203ENST00000494367 1087 ntBASIC14.27□□□□□ -0.13
TUBA1AQ71U36 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 Z92544.3-201ENST00000624747 417 ntBASIC14.27□□□□□ -0.13
TUBA1AQ71U36 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.27□□□□□ -0.13
TUBA1AQ71U36 AL359881.3-201ENST00000602640 1721 ntBASIC14.27□□□□□ -0.13
TUBA1AQ71U36 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AC245100.5-201ENST00000452108 331 ntBASIC14.26□□□□□ -0.13
TUBA1AQ71U36 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AC098859.1-201ENST00000502915 1238 ntBASIC14.26□□□□□ -0.13
TUBA1AQ71U36 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 RARRES2P9-201ENST00000565168 469 ntBASIC14.26□□□□□ -0.13
TUBA1AQ71U36 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AC003101.2-201ENST00000612557 442 ntBASIC14.26□□□□□ -0.13
TUBA1AQ71U36 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AC084121.4-201ENST00000641598 221 ntBASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AF228730.8-201ENST00000642140 221 ntBASIC14.26□□□□□ -0.13
TUBA1AQ71U36 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AC027601.5-201ENST00000624065 2482 ntBASIC14.26□□□□□ -0.13
TUBA1AQ71U36 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TUBA1AQ71U36 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 MBLAC2-202ENST00000514906 1936 ntBASIC14.25□□□□□ -0.13
TUBA1AQ71U36 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TUBA1AQ71U36 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms