Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 AC018665.1-201ENST00000622927 1362 ntBASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 KRT18P13-201ENST00000400056 1290 ntBASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 TSSK5P-201ENST00000423978 907 ntBASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 DNAJB3-202ENST00000449667 1266 ntBASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 CLK3P2-201ENST00000427566 1453 ntBASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDKAL1Q5VV42 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC100757.3-201ENST00000622361 1406 ntBASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC055811.4-201ENST00000624039 1754 ntBASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AL137783.1-201ENST00000623494 1896 ntBASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC107890.1-201ENST00000422478 521 ntBASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AL353779.1-201ENST00000434793 351 ntBASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC009477.1-201ENST00000452936 217 ntBASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC092865.5-201ENST00000545435 363 ntBASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 TIMM17BP1-201ENST00000545713 516 ntBASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDKAL1Q5VV42 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms