Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 AC139530.3-201ENST00000620344 690 ntBASIC16.93■□□□□ 0.3
TSR1Q2NL82 AC092902.6-201ENST00000641783 218 ntBASIC16.93■□□□□ 0.3
TSR1Q2NL82 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 AC015656.1-201ENST00000624209 3578 ntBASIC16.93■□□□□ 0.3
TSR1Q2NL82 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TSR1Q2NL82 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.93■□□□□ 0.3
TSR1Q2NL82 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 YBX2P1-201ENST00000394192 760 ntBASIC16.92■□□□□ 0.3
TSR1Q2NL82 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 UPF3AP3-201ENST00000420996 769 ntBASIC16.92■□□□□ 0.3
TSR1Q2NL82 AL353705.2-201ENST00000428243 662 ntBASIC16.92■□□□□ 0.3
TSR1Q2NL82 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 LINC01225-203ENST00000563550 1244 ntBASIC16.92■□□□□ 0.3
TSR1Q2NL82 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 GRK6P1-201ENST00000400595 1711 ntBASIC16.92■□□□□ 0.3
TSR1Q2NL82 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.92■□□□□ 0.3
TSR1Q2NL82 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TSR1Q2NL82 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TSR1Q2NL82 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 FO393414.2-201ENST00000405153 598 ntBASIC16.91■□□□□ 0.3
TSR1Q2NL82 TIMM8BP1-201ENST00000452384 211 ntBASIC16.91■□□□□ 0.3
TSR1Q2NL82 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.91■□□□□ 0.3
TSR1Q2NL82 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms