Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 FAM8A2P-201ENST00000528813 1142 ntBASIC18.38■□□□□ 0.53
RFX7Q2KHR2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 C2orf69P2-201ENST00000562032 1123 ntBASIC18.38■□□□□ 0.53
RFX7Q2KHR2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 RN7SL560P-201ENST00000577943 264 ntBASIC18.38■□□□□ 0.53
RFX7Q2KHR2 GPR182-203ENST00000622922 591 ntBASIC18.38■□□□□ 0.53
RFX7Q2KHR2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX7Q2KHR2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 AL133338.1-201ENST00000565695 1517 ntBASIC18.37■□□□□ 0.53
RFX7Q2KHR2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 AJ011931.1-201ENST00000618749 2492 ntBASIC18.37■□□□□ 0.53
RFX7Q2KHR2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 GOLGA2P4-201ENST00000441462 777 ntBASIC18.37■□□□□ 0.53
RFX7Q2KHR2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX7Q2KHR2 AC013726.1-201ENST00000563747 2285 ntBASIC18.37■□□□□ 0.53
RFX7Q2KHR2 TNRC18P2-201ENST00000417666 2714 ntBASIC18.37■□□□□ 0.53
RFX7Q2KHR2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 AL359258.3-201ENST00000622910 2331 ntBASIC18.36■□□□□ 0.53
RFX7Q2KHR2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.36■□□□□ 0.53
RFX7Q2KHR2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms