Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AC004461.2-201ENST00000629517 803 ntBASIC14.82□□□□□ -0.04
HMGCS1Q01581 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 AC012508.2-201ENST00000567613 1472 ntBASIC14.82□□□□□ -0.04
HMGCS1Q01581 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 RFPL4AP1-201ENST00000530883 850 ntBASIC14.81□□□□□ -0.04
HMGCS1Q01581 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 AL158211.3-201ENST00000607385 239 ntBASIC14.81□□□□□ -0.04
HMGCS1Q01581 AC106028.4-201ENST00000614509 607 ntBASIC14.81□□□□□ -0.04
HMGCS1Q01581 AL590560.3-201ENST00000623350 461 ntBASIC14.81□□□□□ -0.04
HMGCS1Q01581 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.81□□□□□ -0.04
HMGCS1Q01581 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 AC005912.2-201ENST00000619492 2400 ntBASIC14.81□□□□□ -0.04
HMGCS1Q01581 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGCS1Q01581 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGCS1Q01581 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 AC140479.7-201ENST00000636301 2332 ntBASIC14.8□□□□□ -0.04
HMGCS1Q01581 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms