Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.16■□□□□ 0.18
USP46P62068 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP46P62068 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.16■□□□□ 0.18
USP46P62068 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.15■□□□□ 0.18
USP46P62068 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
USP46P62068 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.15■□□□□ 0.18
USP46P62068 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.15■□□□□ 0.18
USP46P62068 AL009178.2-201ENST00000597278 2719 ntBASIC16.15■□□□□ 0.18
USP46P62068 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
USP46P62068 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.15■□□□□ 0.18
USP46P62068 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
USP46P62068 AC099336.1-201ENST00000417053 1171 ntBASIC16.15■□□□□ 0.18
USP46P62068 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.15■□□□□ 0.18
USP46P62068 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USP46P62068 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.15■□□□□ 0.18
USP46P62068 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.15■□□□□ 0.18
USP46P62068 RPL7P3-201ENST00000441388 714 ntBASIC16.15■□□□□ 0.18
USP46P62068 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.15■□□□□ 0.18
USP46P62068 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.15■□□□□ 0.18
USP46P62068 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.15■□□□□ 0.18
USP46P62068 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 AC007787.1-201ENST00000588095 1583 ntBASIC16.15■□□□□ 0.18
USP46P62068 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
USP46P62068 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
USP46P62068 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USP46P62068 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.15■□□□□ 0.18
USP46P62068 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 AC148477.4-201ENST00000613430 1793 ntBASIC16.15■□□□□ 0.18
USP46P62068 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.15■□□□□ 0.18
USP46P62068 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
USP46P62068 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP46P62068 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
USP46P62068 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.14■□□□□ 0.18
USP46P62068 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
USP46P62068 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
USP46P62068 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
USP46P62068 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.14■□□□□ 0.17
USP46P62068 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
USP46P62068 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.14■□□□□ 0.17
USP46P62068 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.14■□□□□ 0.17
USP46P62068 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 KLF2P2-201ENST00000416807 1039 ntBASIC16.14■□□□□ 0.17
USP46P62068 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.14■□□□□ 0.17
USP46P62068 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP46P62068 AC016694.1-201ENST00000434179 700 ntBASIC16.14■□□□□ 0.17
USP46P62068 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
USP46P62068 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.14■□□□□ 0.17
USP46P62068 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.14■□□□□ 0.17
USP46P62068 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
USP46P62068 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.14■□□□□ 0.17
USP46P62068 AP000812.2-201ENST00000538934 718 ntBASIC16.14■□□□□ 0.17
USP46P62068 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.14■□□□□ 0.17
USP46P62068 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.14■□□□□ 0.17
USP46P62068 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.14■□□□□ 0.17
USP46P62068 AC145423.3-201ENST00000615987 467 ntBASIC16.14■□□□□ 0.17
USP46P62068 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.14■□□□□ 0.17
USP46P62068 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
USP46P62068 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms